Please check note 1632761.
First i thought i have to manually correct all the errors. Later i realized that once i re-import BOBJ integration kit transports would automatically clear the SPAU for these /crystal/ type errors.
Basis should help you in importing the transports but you can refer to following document which shows steps in importing BOBJ integration kit transports. ( I guess you have imported BOBJ transports before upgrade. You might need to start from step 3 mentioned in the below document)
Here are the transports list for your reference
R21K900574 - BusinessObjects OpenSQL reporting objects. Unicode comp.
R21K900575 - BusinessObjects InfoSet reporting objects. Unicode comp.
R21K900576 - BusinessObjects Row Level Security Tool. Unicode comp.
R21K900578 - BusinessObjects Security functions. Unicode comp.
R21K900579 - BusinessObjects Content Administration Workbench
R21K900580 - BusinessObjects Personalization objects
R21K900581 - BusinessObjects BW MDX Driver
R21K900582 - BusinessObjects ODS driver
R21K900585 - BusinessObjects Cluster Definition Editor. Unicode comp.
The provided details are based on our system configuration and i hope it resolves your issue.